To install:
if (!require("devtools"))
install.packages("devtools")
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# install dependencies from Bioconductor
BiocManager::install("ComplexHeatmap")
devtools::install_github("Kalhor-Lab/QFM")
Tutorial for fate map reconstruction:
https://kalhor-lab.github.io/QFM/articles/basic_tutorial.html
Tutorial for simulating cell phylogeny and lineage barcodes:
https://kalhor-lab.github.io/QFM/articles/simulate_phylogeny_and_barcodes.html
To reproduce results in manuscript: Check ‘analysis/’ folder.
Data from the manuscript can be found at:
Report bugs and provide suggestions by sending email to:
Author and maintainer: Weixiang Fang (wfang9@jh.edu)
Or open a new issue on this Github page
Corresponding authors: Reza Kalhor, Hongkai Ji